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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015863580.1_cds_XP_016515715.1_28033
CDS Infomation

[gene=LOC107832391] [db_xref=GeneID:107832391] [protein=auxin efflux carrier component 3-like] [protein_id=XP_016515715.1] [location=complement(join(867..933,1015..1091,1689..1846,2098..2183,2297..2573,2752..3949))] [gbkey=CDS]
Sequence

ATGATATCTTGGCACGATCTTTATGTTGTCTTAACAGCAGTTGTCCCTCTATATGTAGCG
ATGATCTTGGCCTATGGCTCAGTCCGATGGTGGAAAATCTTCTCCCCTGATCAATGCTCC
GGCATCAACCTTTTCGTCGCCATTTTCGCCGTCCCCTTATTGTCTTTCCACTTCATTTCA
ATGAACAATCCTTATGAAATGAACTTCCGTTTCATTGCTGCTGACACACTACAAAAAATC
ATCATGTTAGTTGTGTTATGTTTATGGGCTAACTTGACCAAAAATGGTAGTCTTGAATGG
AGCATAACAATTTTCTCTCTTTCAACACTTCCTAATACACTTGTAATGGGAATTCCTTTG
TTAATTGCAATGTATGGTGAGTACTCAGGTAGTTTAATGGTACAAGTTGTGGTGTTACAA
TGTATCATTTGGTACACCCTTTTGCTATTCTTGTTCGAATATCGCGGCGCAAAGATGTTG
ATCATGGAACAATTCCCTGAAACAGCAGGGGAAATTGTTTCATTAAAAGTTGAATCTGAT
GTTGTTTCCTTAGATGGCCAAGATTTTCTTGAAACAGACGCTGAAATTGGCCAAGATGGT
AAACTTCATGTCACTGTACGAAAATCGAATGTGTCAAGAAAGTCATTTGCTATGACACCT
AGGCCATCAAATCTTACCGGAGCTGAAATTTATAGCTTAAGTTCATCAAGAAATCCAACT
CCAAGAGGGTCTAATTTCAATCACACCGATTTTTACGCGATGATGGGTTTTCCAGGAAGG
TTATCAAATTTTGGTCCCGCGGATACAACTCCTAGACCATCTAATTTCGAAGAAAACTGT
GCTCAGGGAGCTCTGAGTCAGAGCTCCCCGAGATTCGGGTTTTACCCTGCACAGTCTAAT
TTGCCAGCTTCTTATCCGGCTCCAAATCCGGAAATTGCTTCTGTAGTCCCCAAGAACACG
AAAATTCAGCAACAAGTACATTTACAGCAGCAGCAGCAGAATTCTAGGGCTAGCCATGAT
GCTAAGGAACTCCATATGTTTGTATGGAGCTCCAGTGCTTCACCAGTGTCCGAGGCCGCA
GGCCTCCACGTGTTTGGTGGCACTGATTTTGGTGCTAACGAACAATCTTGTCGGTCTGAT
GGTGCCAAAGAAATCAGAATGTTGGTTTCTGATCACCCCCAAAATGGTGATAACAAAGCC
ATTTCCCAAGTTAGTGACTTTGGTGGTGAAGAATTCAGTTTTGGAGGTGTTATTGTTGAT
GGGAAGGATAGAGATGAAAAAAAGGAAGAGAAAGAGGGTCTCACCGGATTACACACCAAG
GCTGCCGGAGTTCAAGATTCCGGTGCCGGAAAACAGATGCCTCCGGCCAGTGTTATGACA
CGTTTGATTTTAATCATGGTTTGGCGCAAGCTTATCCGAAACCCGAACACGTATTCCAGC
CTCATTGGTCTAATTTGGTCCCTAATATCGTACCGGTGGCATGTGCATATGCCCAAAATC
ATGGAAAAGTCAATCTCTATTCTCTCTGACGCTGGTCTTGGAATGGCTATGTTTAGCTTA
GGTTTGTTCATGGCACTTCAACCTAAGATAATTGCATGTGGGAACACAGTGGCTGCTTTC
GCAATGGCTGTAAGATTTCTCACTGGGCCAGCAGTTATGGCTGCTGCTTCAATTATCGTT
GGCCTTCGTGGTACGCTCCTCCATGTCGCCATTGTACAGGCTGCATTGCCGCAAGGGATT
GTTCCGTTTGTGTTTGCTAAGGAGTACAATGTTCATCCGGCTATTCTTAGCACTGCAGTT
ATTTTTGGAATGTTGATAGCATTACCAATCACATTGGTCTACTACATTATCCTTGGATTA
TAA

Peptide Sequence

PEP ID

XP_016515715.1
PEP Infomation

PREDICTED: auxin efflux carrier component 3-like [Nicotiana tabacum]
Sequence

MISWHDLYVVLTAVVPLYVAMILAYGSVRWWKIFSPDQCSGINLFVAIFAVPLLSFHFIS
MNNPYEMNFRFIAADTLQKIIMLVVLCLWANLTKNGSLEWSITIFSLSTLPNTLVMGIPL
LIAMYGEYSGSLMVQVVVLQCIIWYTLLLFLFEYRGAKMLIMEQFPETAGEIVSLKVESD
VVSLDGQDFLETDAEIGQDGKLHVTVRKSNVSRKSFAMTPRPSNLTGAEIYSLSSSRNPT
PRGSNFNHTDFYAMMGFPGRLSNFGPADTTPRPSNFEENCAQGALSQSSPRFGFYPAQSN
LPASYPAPNPEIASVVPKNTKIQQQVHLQQQQQNSRASHDAKELHMFVWSSSASPVSEAA
GLHVFGGTDFGANEQSCRSDGAKEIRMLVSDHPQNGDNKAISQVSDFGGEEFSFGGVIVD
GKDRDEKKEEKEGLTGLHTKAAGVQDSGAGKQMPPASVMTRLILIMVWRKLIRNPNTYSS
LIGLIWSLISYRWHVHMPKIMEKSISILSDAGLGMAMFSLGLFMALQPKIIACGNTVAAF
AMAVRFLTGPAVMAAASIIVGLRGTLLHVAIVQAALPQGIVPFVFAKEYNVHPAILSTAV
IFGMLIALPITLVYYIILGL

Transcript Sequence

Gene sequence data has not been registered.